Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Gm45784-201ENSMUST00000188360 142 ntBASIC11.49□□□□□ -0.57
SgcdP82347 Gm29608-201ENSMUST00000190444 463 ntBASIC11.49□□□□□ -0.57
SgcdP82347 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.49□□□□□ -0.57
SgcdP82347 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgcdP82347 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.49□□□□□ -0.57
SgcdP82347 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.49□□□□□ -0.57
SgcdP82347 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgcdP82347 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcdP82347 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgcdP82347 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcdP82347 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgcdP82347 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.49□□□□□ -0.57
SgcdP82347 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcdP82347 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcdP82347 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcdP82347 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgcdP82347 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcdP82347 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcdP82347 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgcdP82347 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcdP82347 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SgcdP82347 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcdP82347 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SgcdP82347 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.48□□□□□ -0.57
SgcdP82347 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SgcdP82347 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SgcdP82347 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.48□□□□□ -0.57
SgcdP82347 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.48□□□□□ -0.57
SgcdP82347 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.48□□□□□ -0.57
SgcdP82347 Gm27847-201ENSMUST00000183711 107 ntBASIC11.48□□□□□ -0.57
SgcdP82347 Gm27375-201ENSMUST00000183799 107 ntBASIC11.48□□□□□ -0.57
SgcdP82347 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.48□□□□□ -0.57
SgcdP82347 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.48□□□□□ -0.57
SgcdP82347 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
SgcdP82347 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.48□□□□□ -0.57
SgcdP82347 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.48□□□□□ -0.57
SgcdP82347 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SgcdP82347 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.48□□□□□ -0.57
SgcdP82347 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.48□□□□□ -0.57
SgcdP82347 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.48□□□□□ -0.57
SgcdP82347 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
SgcdP82347 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.48□□□□□ -0.57
SgcdP82347 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.48□□□□□ -0.57
SgcdP82347 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.48□□□□□ -0.57
SgcdP82347 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
SgcdP82347 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SgcdP82347 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SgcdP82347 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SgcdP82347 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SgcdP82347 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SgcdP82347 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.47□□□□□ -0.57
SgcdP82347 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.47□□□□□ -0.57
SgcdP82347 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.47□□□□□ -0.57
SgcdP82347 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.47□□□□□ -0.57
SgcdP82347 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
SgcdP82347 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.47□□□□□ -0.57
SgcdP82347 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.47□□□□□ -0.57
SgcdP82347 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.47□□□□□ -0.57
SgcdP82347 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SgcdP82347 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.47□□□□□ -0.57
SgcdP82347 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.47□□□□□ -0.57
SgcdP82347 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.47□□□□□ -0.57
SgcdP82347 Snora78-201ENSMUST00000158630 128 ntBASIC11.47□□□□□ -0.57
SgcdP82347 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.47□□□□□ -0.57
SgcdP82347 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms