Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Hmgb1P63158 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Hmgb1P63158 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb1P63158 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hmgb1P63158 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb1P63158 Gm4984-201ENSMUST00000115987 360 ntBASIC13.6□□□□□ -0.23
Hmgb1P63158 Gm12390-201ENSMUST00000117897 397 ntBASIC13.6□□□□□ -0.23
Hmgb1P63158 Gm12314-201ENSMUST00000118104 538 ntBASIC13.6□□□□□ -0.23
Hmgb1P63158 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Hmgb1P63158 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb1P63158 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.6□□□□□ -0.23
Hmgb1P63158 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Hmgb1P63158 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Hmgb1P63158 Gm35960-201ENSMUST00000202712 767 ntBASIC13.6□□□□□ -0.23
Hmgb1P63158 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.6□□□□□ -0.23
Hmgb1P63158 Gm40466-201ENSMUST00000212174 422 ntBASIC13.6□□□□□ -0.23
Hmgb1P63158 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.6□□□□□ -0.23
Hmgb1P63158 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Hmgb1P63158 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb1P63158 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb1P63158 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Hmgb1P63158 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.6□□□□□ -0.23
Hmgb1P63158 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb1P63158 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hmgb1P63158 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb1P63158 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb1P63158 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb1P63158 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb1P63158 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hmgb1P63158 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb1P63158 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb1P63158 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb1P63158 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgb1P63158 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.59□□□□□ -0.23
Hmgb1P63158 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.59□□□□□ -0.23
Hmgb1P63158 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Hmgb1P63158 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.59□□□□□ -0.23
Hmgb1P63158 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
Hmgb1P63158 Gm11591-201ENSMUST00000120063 702 ntBASIC13.59□□□□□ -0.23
Hmgb1P63158 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.59□□□□□ -0.23
Hmgb1P63158 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.59□□□□□ -0.23
Hmgb1P63158 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.59□□□□□ -0.23
Hmgb1P63158 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.59□□□□□ -0.23
Hmgb1P63158 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.59□□□□□ -0.23
Hmgb1P63158 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.59□□□□□ -0.23
Hmgb1P63158 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.59□□□□□ -0.23
Hmgb1P63158 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Hmgb1P63158 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Hmgb1P63158 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.59□□□□□ -0.23
Hmgb1P63158 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Hmgb1P63158 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Hmgb1P63158 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Hmgb1P63158 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Hmgb1P63158 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Hmgb1P63158 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgb1P63158 Gm43375-201ENSMUST00000196705 2480 ntBASIC13.58□□□□□ -0.23
Hmgb1P63158 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.58□□□□□ -0.23
Hmgb1P63158 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hmgb1P63158 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hmgb1P63158 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgb1P63158 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Hmgb1P63158 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Hmgb1P63158 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgb1P63158 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Hmgb1P63158 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgb1P63158 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Hmgb1P63158 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Hmgb1P63158 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgb1P63158 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgb1P63158 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgb1P63158 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgb1P63158 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgb1P63158 Gm23119-201ENSMUST00000158610 140 ntBASIC13.58□□□□□ -0.24
Hmgb1P63158 Gm16379-201ENSMUST00000161469 348 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms