Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cks1bP61025 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cks1bP61025 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cks1bP61025 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC8.84□□□□□ -0.99
Cks1bP61025 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cks1bP61025 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cks1bP61025 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cks1bP61025 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cks1bP61025 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC8.84□□□□□ -0.99
Cks1bP61025 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC8.84□□□□□ -0.99
Cks1bP61025 AC161252.3-201ENSMUST00000225465 1549 ntBASIC8.84□□□□□ -0.99
Cks1bP61025 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cks1bP61025 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cks1bP61025 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cks1bP61025 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Cks1bP61025 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cks1bP61025 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cks1bP61025 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cks1bP61025 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cks1bP61025 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Cks1bP61025 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC8.84□□□□□ -1
Cks1bP61025 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Cks1bP61025 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Gm36970-201ENSMUST00000193688 1859 ntBASIC8.83□□□□□ -1
Cks1bP61025 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC8.83□□□□□ -1
Cks1bP61025 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Gm43365-201ENSMUST00000196522 2106 ntBASIC8.83□□□□□ -1
Cks1bP61025 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Gm42690-201ENSMUST00000197921 1836 ntBASIC8.83□□□□□ -1
Cks1bP61025 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC8.83□□□□□ -1
Cks1bP61025 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Cks1bP61025 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC8.83□□□□□ -1
Cks1bP61025 Gm2756-201ENSMUST00000195851 400 ntBASIC8.83□□□□□ -1
Cks1bP61025 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC8.83□□□□□ -1
Cks1bP61025 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC8.83□□□□□ -1
Cks1bP61025 Gm17795-201ENSMUST00000214505 757 ntBASIC8.83□□□□□ -1
Cks1bP61025 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC8.83□□□□□ -1
Cks1bP61025 AC154846.1-201ENSMUST00000226278 862 ntBASIC8.83□□□□□ -1
Cks1bP61025 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Cks1bP61025 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC8.83□□□□□ -1
Cks1bP61025 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Cks1bP61025 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC8.83□□□□□ -1
Cks1bP61025 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Cks1bP61025 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cks1bP61025 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Cks1bP61025 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Cks1bP61025 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC8.82□□□□□ -1
Cks1bP61025 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Gm38192-201ENSMUST00000194364 1847 ntBASIC8.82□□□□□ -1
Cks1bP61025 Gm37391-201ENSMUST00000194891 2318 ntBASIC8.82□□□□□ -1
Cks1bP61025 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Cks1bP61025 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC8.82□□□□□ -1
Cks1bP61025 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cks1bP61025 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms