Protein–RNA interactions for Protein: P56399

Usp5, Ubiquitin carboxyl-terminal hydrolase 5, mousemouse

Known RBP Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp5P56399 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp5P56399 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Usp5P56399 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.38□□□□□ -0.11
Usp5P56399 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.38□□□□□ -0.11
Usp5P56399 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp5P56399 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp5P56399 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp5P56399 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Usp5P56399 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Usp5P56399 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Gm24934-201ENSMUST00000103764 111 ntBASIC14.37□□□□□ -0.11
Usp5P56399 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Usp5P56399 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.37□□□□□ -0.11
Usp5P56399 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.37□□□□□ -0.11
Usp5P56399 Rprl1-202ENSMUST00000198476 238 ntBASIC14.37□□□□□ -0.11
Usp5P56399 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Gm45224-201ENSMUST00000208203 414 ntBASIC14.37□□□□□ -0.11
Usp5P56399 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Usp5P56399 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.37□□□□□ -0.11
Usp5P56399 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Usp5P56399 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Usp5P56399 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Usp5P56399 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.37□□□□□ -0.11
Usp5P56399 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Usp5P56399 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.37□□□□□ -0.11
Usp5P56399 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp5P56399 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Usp5P56399 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Usp5P56399 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Usp5P56399 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.36□□□□□ -0.11
Usp5P56399 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp5P56399 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp5P56399 Gm44262-201ENSMUST00000204969 372 ntBASIC14.36□□□□□ -0.11
Usp5P56399 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp5P56399 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp5P56399 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp5P56399 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.36□□□□□ -0.11
Usp5P56399 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Gm9996-201ENSMUST00000070359 913 ntBASIC14.36□□□□□ -0.11
Usp5P56399 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.36□□□□□ -0.11
Usp5P56399 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Usp5P56399 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.36□□□□□ -0.11
Usp5P56399 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.36□□□□□ -0.11
Usp5P56399 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp5P56399 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp5P56399 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp5P56399 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp5P56399 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp5P56399 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp5P56399 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp5P56399 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp5P56399 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp5P56399 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp5P56399 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp5P56399 Gm13296-201ENSMUST00000117854 997 ntBASIC14.35□□□□□ -0.11
Usp5P56399 Gm12997-201ENSMUST00000120207 640 ntBASIC14.35□□□□□ -0.11
Usp5P56399 Gm14017-201ENSMUST00000121934 386 ntBASIC14.35□□□□□ -0.11
Usp5P56399 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp5P56399 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.35□□□□□ -0.11
Usp5P56399 Gm45186-201ENSMUST00000206874 478 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms