Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cacnb3P54285 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.34□□□□□ -0.11
Cacnb3P54285 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.34□□□□□ -0.11
Cacnb3P54285 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cacnb3P54285 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.34□□□□□ -0.11
Cacnb3P54285 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.34□□□□□ -0.11
Cacnb3P54285 Gm12164-201ENSMUST00000121695 551 ntBASIC14.34□□□□□ -0.11
Cacnb3P54285 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cacnb3P54285 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.34□□□□□ -0.11
Cacnb3P54285 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Cacnb3P54285 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Cacnb3P54285 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.34□□□□□ -0.11
Cacnb3P54285 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.34□□□□□ -0.11
Cacnb3P54285 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Gm43916-201ENSMUST00000205062 967 ntBASIC14.34□□□□□ -0.11
Cacnb3P54285 Gm4157-201ENSMUST00000211647 679 ntBASIC14.34□□□□□ -0.11
Cacnb3P54285 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.34□□□□□ -0.11
Cacnb3P54285 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.34□□□□□ -0.11
Cacnb3P54285 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.34□□□□□ -0.11
Cacnb3P54285 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.34□□□□□ -0.11
Cacnb3P54285 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cacnb3P54285 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.34□□□□□ -0.11
Cacnb3P54285 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cacnb3P54285 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cacnb3P54285 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cacnb3P54285 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cacnb3P54285 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Cacnb3P54285 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cacnb3P54285 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.33□□□□□ -0.11
Cacnb3P54285 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cacnb3P54285 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
Cacnb3P54285 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacnb3P54285 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacnb3P54285 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cacnb3P54285 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cacnb3P54285 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Cacnb3P54285 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.33□□□□□ -0.12
Cacnb3P54285 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacnb3P54285 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cacnb3P54285 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacnb3P54285 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacnb3P54285 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.33□□□□□ -0.12
Cacnb3P54285 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cacnb3P54285 Gm12857-201ENSMUST00000117678 592 ntBASIC14.33□□□□□ -0.12
Cacnb3P54285 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.33□□□□□ -0.12
Cacnb3P54285 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14.33□□□□□ -0.12
Cacnb3P54285 Gm8100-201ENSMUST00000182906 988 ntBASIC14.33□□□□□ -0.12
Cacnb3P54285 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.33□□□□□ -0.12
Cacnb3P54285 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.33□□□□□ -0.12
Cacnb3P54285 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacnb3P54285 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.33□□□□□ -0.12
Cacnb3P54285 Gm10288-201ENSMUST00000084614 537 ntBASIC14.33□□□□□ -0.12
Cacnb3P54285 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacnb3P54285 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cacnb3P54285 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacnb3P54285 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.33□□□□□ -0.12
Cacnb3P54285 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cacnb3P54285 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cacnb3P54285 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.33□□□□□ -0.12
Cacnb3P54285 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacnb3P54285 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacnb3P54285 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacnb3P54285 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cacnb3P54285 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cacnb3P54285 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cacnb3P54285 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacnb3P54285 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.33□□□□□ -0.12
Cacnb3P54285 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cacnb3P54285 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.32□□□□□ -0.12
Cacnb3P54285 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.32□□□□□ -0.12
Cacnb3P54285 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cacnb3P54285 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cacnb3P54285 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.32□□□□□ -0.12
Cacnb3P54285 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms