Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Hoxc5P32043 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Hoxc5P32043 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hoxc5P32043 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxc5P32043 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.44□□□□□ -0.58
Hoxc5P32043 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.44□□□□□ -0.58
Hoxc5P32043 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Hoxc5P32043 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxc5P32043 Gm11597-201ENSMUST00000121423 964 ntBASIC11.44□□□□□ -0.58
Hoxc5P32043 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.44□□□□□ -0.58
Hoxc5P32043 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Hoxc5P32043 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.44□□□□□ -0.58
Hoxc5P32043 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Gm19184-201ENSMUST00000196798 928 ntBASIC11.44□□□□□ -0.58
Hoxc5P32043 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Hoxc5P32043 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.44□□□□□ -0.58
Hoxc5P32043 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.44□□□□□ -0.58
Hoxc5P32043 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.44□□□□□ -0.58
Hoxc5P32043 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxc5P32043 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Hoxc5P32043 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.44□□□□□ -0.58
Hoxc5P32043 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hoxc5P32043 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxc5P32043 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Map1b-203ENSMUST00000223725 2669 ntBASIC11.43□□□□□ -0.58
Hoxc5P32043 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxc5P32043 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxc5P32043 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.43□□□□□ -0.58
Hoxc5P32043 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Hoxc5P32043 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.43□□□□□ -0.58
Hoxc5P32043 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxc5P32043 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.43□□□□□ -0.58
Hoxc5P32043 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.43□□□□□ -0.58
Hoxc5P32043 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.43□□□□□ -0.58
Hoxc5P32043 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxc5P32043 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Hoxc5P32043 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.43□□□□□ -0.58
Hoxc5P32043 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hoxc5P32043 Gm11591-201ENSMUST00000120063 702 ntBASIC11.43□□□□□ -0.58
Hoxc5P32043 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hoxc5P32043 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.43□□□□□ -0.58
Hoxc5P32043 Gm8738-201ENSMUST00000172606 329 ntBASIC11.43□□□□□ -0.58
Hoxc5P32043 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.43□□□□□ -0.58
Hoxc5P32043 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Gm22058-201ENSMUST00000083393 310 ntBASIC11.43□□□□□ -0.58
Hoxc5P32043 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Hoxc5P32043 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hoxc5P32043 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxc5P32043 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hoxc5P32043 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hoxc5P32043 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxc5P32043 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms