Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxd8P23463 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Hoxd8P23463 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxd8P23463 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxd8P23463 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.73□□□□□ -0.37
Hoxd8P23463 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxd8P23463 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxd8P23463 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxd8P23463 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxd8P23463 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxd8P23463 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxd8P23463 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxd8P23463 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.72□□□□□ -0.37
Hoxd8P23463 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Gm11663-201ENSMUST00000117888 290 ntBASIC12.72□□□□□ -0.37
Hoxd8P23463 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Gm15595-201ENSMUST00000120840 961 ntBASIC12.72□□□□□ -0.37
Hoxd8P23463 Gm17391-201ENSMUST00000171036 126 ntBASIC12.72□□□□□ -0.37
Hoxd8P23463 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.72□□□□□ -0.37
Hoxd8P23463 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxd8P23463 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Gm10179-201ENSMUST00000086233 688 ntBASIC12.72□□□□□ -0.37
Hoxd8P23463 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.72□□□□□ -0.37
Hoxd8P23463 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Hoxd8P23463 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.72□□□□□ -0.37
Hoxd8P23463 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hoxd8P23463 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxd8P23463 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxd8P23463 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxd8P23463 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxd8P23463 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Hoxd8P23463 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxd8P23463 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxd8P23463 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.71□□□□□ -0.37
Hoxd8P23463 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxd8P23463 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Hoxd8P23463 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxd8P23463 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxd8P23463 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxd8P23463 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Hoxd8P23463 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.71□□□□□ -0.37
Hoxd8P23463 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxd8P23463 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hoxd8P23463 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Hoxd8P23463 Gm15881-201ENSMUST00000148792 942 ntBASIC12.71□□□□□ -0.37
Hoxd8P23463 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Hoxd8P23463 Gm5706-201ENSMUST00000181525 993 ntBASIC12.71□□□□□ -0.37
Hoxd8P23463 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.71□□□□□ -0.37
Hoxd8P23463 Gm43452-201ENSMUST00000201873 991 ntBASIC12.71□□□□□ -0.37
Hoxd8P23463 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms