Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pde6bP23440 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pde6bP23440 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.51□□□□□ -0.25
Pde6bP23440 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.51□□□□□ -0.25
Pde6bP23440 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.51□□□□□ -0.25
Pde6bP23440 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.51□□□□□ -0.25
Pde6bP23440 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.51□□□□□ -0.25
Pde6bP23440 Gm39404-201ENSMUST00000216350 313 ntBASIC13.51□□□□□ -0.25
Pde6bP23440 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pde6bP23440 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.51□□□□□ -0.25
Pde6bP23440 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pde6bP23440 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pde6bP23440 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pde6bP23440 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Gm12314-201ENSMUST00000118104 538 ntBASIC13.5□□□□□ -0.25
Pde6bP23440 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.5□□□□□ -0.25
Pde6bP23440 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Pde6bP23440 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.5□□□□□ -0.25
Pde6bP23440 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.5□□□□□ -0.25
Pde6bP23440 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pde6bP23440 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pde6bP23440 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pde6bP23440 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.5□□□□□ -0.25
Pde6bP23440 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pde6bP23440 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Pde6bP23440 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Gm23200-201ENSMUST00000104379 132 ntBASIC13.49□□□□□ -0.25
Pde6bP23440 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Gm14263-201ENSMUST00000117955 746 ntBASIC13.49□□□□□ -0.25
Pde6bP23440 Gm12176-201ENSMUST00000121420 875 ntBASIC13.49□□□□□ -0.25
Pde6bP23440 Gm11597-201ENSMUST00000121423 964 ntBASIC13.49□□□□□ -0.25
Pde6bP23440 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.49□□□□□ -0.25
Pde6bP23440 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Gm24749-201ENSMUST00000157838 343 ntBASIC13.49□□□□□ -0.25
Pde6bP23440 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pde6bP23440 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Gm17812-201ENSMUST00000204935 318 ntBASIC13.49□□□□□ -0.25
Pde6bP23440 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.49□□□□□ -0.25
Pde6bP23440 Gm45598-202ENSMUST00000210719 986 ntBASIC13.49□□□□□ -0.25
Pde6bP23440 Gm18730-201ENSMUST00000218038 343 ntBASIC13.49□□□□□ -0.25
Pde6bP23440 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.49□□□□□ -0.25
Pde6bP23440 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.49□□□□□ -0.25
Pde6bP23440 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.49□□□□□ -0.25
Pde6bP23440 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pde6bP23440 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 113.4 ms