Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
VimP20152 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.48□□□□□ -0.41
VimP20152 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
VimP20152 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.48□□□□□ -0.41
VimP20152 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
VimP20152 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
VimP20152 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
VimP20152 Gm15467-201ENSMUST00000120582 445 ntBASIC12.48□□□□□ -0.41
VimP20152 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
VimP20152 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
VimP20152 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.48□□□□□ -0.41
VimP20152 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.48□□□□□ -0.41
VimP20152 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
VimP20152 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.48□□□□□ -0.41
VimP20152 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
VimP20152 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VimP20152 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
VimP20152 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.47□□□□□ -0.41
VimP20152 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.47□□□□□ -0.41
VimP20152 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.47□□□□□ -0.41
VimP20152 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.47□□□□□ -0.41
VimP20152 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.47□□□□□ -0.41
VimP20152 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Gm16202-201ENSMUST00000117532 544 ntBASIC12.47□□□□□ -0.41
VimP20152 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.47□□□□□ -0.41
VimP20152 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.47□□□□□ -0.41
VimP20152 Gm27321-201ENSMUST00000185021 205 ntBASIC12.47□□□□□ -0.41
VimP20152 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.47□□□□□ -0.41
VimP20152 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.47□□□□□ -0.41
VimP20152 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
VimP20152 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
VimP20152 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
VimP20152 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
VimP20152 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.47□□□□□ -0.41
VimP20152 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
VimP20152 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.47□□□□□ -0.41
VimP20152 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VimP20152 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VimP20152 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms