Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.84□□□□□ -0.51
Cntn1P12960 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 Gm9083-201ENSMUST00000120423 819 ntBASIC11.84□□□□□ -0.51
Cntn1P12960 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.84□□□□□ -0.51
Cntn1P12960 Gm14760-201ENSMUST00000121831 999 ntBASIC11.84□□□□□ -0.51
Cntn1P12960 Gm14017-201ENSMUST00000121934 386 ntBASIC11.84□□□□□ -0.51
Cntn1P12960 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.84□□□□□ -0.51
Cntn1P12960 Gm6963-201ENSMUST00000147879 379 ntBASIC11.84□□□□□ -0.51
Cntn1P12960 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cntn1P12960 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.84□□□□□ -0.51
Cntn1P12960 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.84□□□□□ -0.51
Cntn1P12960 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.84□□□□□ -0.51
Cntn1P12960 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.84□□□□□ -0.51
Cntn1P12960 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cntn1P12960 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.84□□□□□ -0.51
Cntn1P12960 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.84□□□□□ -0.51
Cntn1P12960 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cntn1P12960 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cntn1P12960 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cntn1P12960 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Cntn1P12960 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.51
Cntn1P12960 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.83□□□□□ -0.52
Cntn1P12960 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.83□□□□□ -0.52
Cntn1P12960 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cntn1P12960 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.83□□□□□ -0.52
Cntn1P12960 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cntn1P12960 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cntn1P12960 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.83□□□□□ -0.52
Cntn1P12960 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.83□□□□□ -0.52
Cntn1P12960 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cntn1P12960 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Cntn1P12960 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cntn1P12960 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.83□□□□□ -0.52
Cntn1P12960 Gm12015-201ENSMUST00000117065 843 ntBASIC11.83□□□□□ -0.52
Cntn1P12960 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.83□□□□□ -0.52
Cntn1P12960 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cntn1P12960 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cntn1P12960 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.83□□□□□ -0.52
Cntn1P12960 Gm2260-201ENSMUST00000184965 657 ntBASIC11.83□□□□□ -0.52
Cntn1P12960 Gm37466-201ENSMUST00000195692 652 ntBASIC11.83□□□□□ -0.52
Cntn1P12960 Rprl1-202ENSMUST00000198476 238 ntBASIC11.83□□□□□ -0.52
Cntn1P12960 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.83□□□□□ -0.52
Cntn1P12960 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cntn1P12960 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.83□□□□□ -0.52
Cntn1P12960 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.83□□□□□ -0.52
Cntn1P12960 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cntn1P12960 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn1P12960 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn1P12960 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn1P12960 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn1P12960 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn1P12960 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn1P12960 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn1P12960 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn1P12960 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn1P12960 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn1P12960 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.82□□□□□ -0.52
Cntn1P12960 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn1P12960 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn1P12960 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn1P12960 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn1P12960 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn1P12960 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.82□□□□□ -0.52
Cntn1P12960 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.82□□□□□ -0.52
Cntn1P12960 Gm24990-201ENSMUST00000157406 323 ntBASIC11.82□□□□□ -0.52
Cntn1P12960 Gm23119-201ENSMUST00000158610 140 ntBASIC11.82□□□□□ -0.52
Cntn1P12960 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Cntn1P12960 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cntn1P12960 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms