Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Gm6007-201ENSMUST00000208170 823 ntBASIC10.19□□□□□ -0.78
Cxcl1P12850 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.19□□□□□ -0.78
Cxcl1P12850 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Cxcl1P12850 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Cxcl1P12850 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcl1P12850 Gm10012-201ENSMUST00000078252 192 ntBASIC10.19□□□□□ -0.78
Cxcl1P12850 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcl1P12850 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcl1P12850 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcl1P12850 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcl1P12850 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcl1P12850 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcl1P12850 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcl1P12850 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cxcl1P12850 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcl1P12850 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcl1P12850 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcl1P12850 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcl1P12850 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcl1P12850 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Cxcl1P12850 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcl1P12850 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcl1P12850 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cxcl1P12850 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.18□□□□□ -0.78
Cxcl1P12850 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.18□□□□□ -0.78
Cxcl1P12850 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Gm27437-201ENSMUST00000183429 107 ntBASIC10.18□□□□□ -0.78
Cxcl1P12850 Mir6977-201ENSMUST00000184960 64 ntBASIC10.18□□□□□ -0.78
Cxcl1P12850 Gm18304-201ENSMUST00000189162 546 ntBASIC10.18□□□□□ -0.78
Cxcl1P12850 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.18□□□□□ -0.78
Cxcl1P12850 AC135669.1-201ENSMUST00000213585 412 ntBASIC10.18□□□□□ -0.78
Cxcl1P12850 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.18□□□□□ -0.78
Cxcl1P12850 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.18□□□□□ -0.78
Cxcl1P12850 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.18□□□□□ -0.78
Cxcl1P12850 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.18□□□□□ -0.78
Cxcl1P12850 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cxcl1P12850 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Cxcl1P12850 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl1P12850 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl1P12850 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cxcl1P12850 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms