Protein–RNA interactions for Protein: P06728

Apoa4, Apolipoprotein A-IV, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa4P06728 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.12□□□□□ -0.47
Apoa4P06728 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Apoa4P06728 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.12□□□□□ -0.47
Apoa4P06728 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.12□□□□□ -0.47
Apoa4P06728 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.12□□□□□ -0.47
Apoa4P06728 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.12□□□□□ -0.47
Apoa4P06728 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.12□□□□□ -0.47
Apoa4P06728 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Gm12390-201ENSMUST00000117897 397 ntBASIC12.12□□□□□ -0.47
Apoa4P06728 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.12□□□□□ -0.47
Apoa4P06728 Gm1335-201ENSMUST00000121653 386 ntBASIC12.12□□□□□ -0.47
Apoa4P06728 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.12□□□□□ -0.47
Apoa4P06728 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.12□□□□□ -0.47
Apoa4P06728 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Apoa4P06728 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.12□□□□□ -0.47
Apoa4P06728 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.12□□□□□ -0.47
Apoa4P06728 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.12□□□□□ -0.47
Apoa4P06728 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Apoa4P06728 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Apoa4P06728 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Apoa4P06728 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.12□□□□□ -0.47
Apoa4P06728 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Apoa4P06728 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.12□□□□□ -0.47
Apoa4P06728 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
Apoa4P06728 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Apoa4P06728 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.12□□□□□ -0.47
Apoa4P06728 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Apoa4P06728 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Apoa4P06728 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Apoa4P06728 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.11□□□□□ -0.47
Apoa4P06728 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.11□□□□□ -0.47
Apoa4P06728 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.11□□□□□ -0.47
Apoa4P06728 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Apoa4P06728 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.11□□□□□ -0.47
Apoa4P06728 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Apoa4P06728 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.11□□□□□ -0.47
Apoa4P06728 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.11□□□□□ -0.47
Apoa4P06728 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.11□□□□□ -0.47
Apoa4P06728 Gm6007-201ENSMUST00000208170 823 ntBASIC12.11□□□□□ -0.47
Apoa4P06728 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.11□□□□□ -0.47
Apoa4P06728 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Apoa4P06728 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Apoa4P06728 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.11□□□□□ -0.47
Apoa4P06728 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.11□□□□□ -0.47
Apoa4P06728 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Apoa4P06728 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms