Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.84□□□□□ -0.67
P04224 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
P04224 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.84□□□□□ -0.67
P04224 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
P04224 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.84□□□□□ -0.67
P04224 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P04224 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
P04224 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
P04224 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.83□□□□□ -0.68
P04224 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.83□□□□□ -0.68
P04224 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.83□□□□□ -0.68
P04224 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.83□□□□□ -0.68
P04224 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.83□□□□□ -0.68
P04224 Gm24694-201ENSMUST00000180054 110 ntBASIC10.83□□□□□ -0.68
P04224 Gm27663-201ENSMUST00000184839 110 ntBASIC10.83□□□□□ -0.68
P04224 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.83□□□□□ -0.68
P04224 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.83□□□□□ -0.68
P04224 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
P04224 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.83□□□□□ -0.68
P04224 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.83□□□□□ -0.68
P04224 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.83□□□□□ -0.68
P04224 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.83□□□□□ -0.68
P04224 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
P04224 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
P04224 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P04224 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
P04224 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.82□□□□□ -0.68
P04224 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
P04224 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
P04224 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
P04224 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.82□□□□□ -0.68
P04224 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.82□□□□□ -0.68
P04224 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
P04224 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.82□□□□□ -0.68
P04224 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
P04224 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
P04224 Gm14719-201ENSMUST00000121891 340 ntBASIC10.82□□□□□ -0.68
P04224 Gm5354-201ENSMUST00000182417 973 ntBASIC10.82□□□□□ -0.68
P04224 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.82□□□□□ -0.68
P04224 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.82□□□□□ -0.68
P04224 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.82□□□□□ -0.68
P04224 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
P04224 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
P04224 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.82□□□□□ -0.68
P04224 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P04224 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms