Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a1P02463 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a1P02463 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.86□□□□□ -0.03
Col4a1P02463 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.86□□□□□ -0.03
Col4a1P02463 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Col4a1P02463 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a1P02463 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Col4a1P02463 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Col4a1P02463 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC14.85□□□□□ -0.03
Col4a1P02463 Gm9645-201ENSMUST00000197131 792 ntBASIC14.85□□□□□ -0.03
Col4a1P02463 Gm7504-201ENSMUST00000201449 424 ntBASIC14.85□□□□□ -0.03
Col4a1P02463 Gm7940-201ENSMUST00000218195 769 ntBASIC14.85□□□□□ -0.03
Col4a1P02463 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.85□□□□□ -0.03
Col4a1P02463 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.85□□□□□ -0.03
Col4a1P02463 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col4a1P02463 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Col4a1P02463 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC14.84□□□□□ -0.03
Col4a1P02463 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.84□□□□□ -0.03
Col4a1P02463 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Gm17798-201ENSMUST00000182282 1035 ntBASIC14.84□□□□□ -0.03
Col4a1P02463 Gm8531-201ENSMUST00000188319 893 ntBASIC14.84□□□□□ -0.03
Col4a1P02463 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Col4a1P02463 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Col4a1P02463 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.84□□□□□ -0.03
Col4a1P02463 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Col4a1P02463 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Col4a1P02463 Gm23272-201ENSMUST00000104053 129 ntBASIC14.84□□□□□ -0.03
Col4a1P02463 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC14.84□□□□□ -0.03
Col4a1P02463 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC14.84□□□□□ -0.03
Col4a1P02463 Gm8574-201ENSMUST00000203207 924 ntBASIC14.84□□□□□ -0.03
Col4a1P02463 Gm3793-201ENSMUST00000204973 672 ntBASIC14.84□□□□□ -0.03
Col4a1P02463 Gm17825-201ENSMUST00000206836 794 ntBASIC14.84□□□□□ -0.03
Col4a1P02463 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col4a1P02463 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col4a1P02463 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col4a1P02463 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col4a1P02463 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Col4a1P02463 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.83□□□□□ -0.03
Col4a1P02463 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col4a1P02463 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a1P02463 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Col4a1P02463 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a1P02463 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.83□□□□□ -0.04
Col4a1P02463 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Col4a1P02463 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a1P02463 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Col4a1P02463 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a1P02463 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a1P02463 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Col4a1P02463 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col4a1P02463 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms