Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup50Q9JIH2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup50Q9JIH2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup50Q9JIH2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Nup50Q9JIH2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup50Q9JIH2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup50Q9JIH2 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup50Q9JIH2 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup50Q9JIH2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup50Q9JIH2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup50Q9JIH2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup50Q9JIH2 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup50Q9JIH2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup50Q9JIH2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.02□□□□□ -0.32
Nup50Q9JIH2 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup50Q9JIH2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup50Q9JIH2 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nup50Q9JIH2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Nup50Q9JIH2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Nup50Q9JIH2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup50Q9JIH2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup50Q9JIH2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nup50Q9JIH2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Gm24830-201ENSMUST00000102024 166 ntBASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Gm26232-201ENSMUST00000083360 166 ntBASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Paupar-201ENSMUST00000194826 3482 ntBASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup50Q9JIH2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Gm13226-201ENSMUST00000117838 404 ntBASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Gm13316-201ENSMUST00000140537 691 ntBASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Gm8602-201ENSMUST00000184045 607 ntBASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Gm27731-201ENSMUST00000185192 107 ntBASIC13.01□□□□□ -0.33
Nup50Q9JIH2 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup50Q9JIH2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms