Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Map1b-203ENSMUST00000223725 2669 ntBASIC11.43□□□□□ -0.58
Trim13Q9CYB0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Gm12859-201ENSMUST00000117834 427 ntBASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim13Q9CYB0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Gm28631-201ENSMUST00000190740 334 ntBASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.41□□□□□ -0.58
Trim13Q9CYB0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim13Q9CYB0 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim13Q9CYB0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms