Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
H2afb1Q9CQ70 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Gm12314-201ENSMUST00000118104 538 ntBASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Gm16379-201ENSMUST00000161469 348 ntBASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Gm8762-201ENSMUST00000193486 339 ntBASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
H2afb1Q9CQ70 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Gm12390-201ENSMUST00000117897 397 ntBASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Gm11591-201ENSMUST00000120063 702 ntBASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Gm23119-201ENSMUST00000158610 140 ntBASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
H2afb1Q9CQ70 Gm44958-201ENSMUST00000203734 736 ntBASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms