Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Gm23085-201ENSMUST00000157849 293 ntBASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Gm37905-201ENSMUST00000195310 341 ntBASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 CT009738.1-201ENSMUST00000219031 809 ntBASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nkx6-1Q99MA9 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Gm23153-201ENSMUST00000175323 313 ntBASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Gm3332-201ENSMUST00000189337 928 ntBASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Gm19994-201ENSMUST00000217086 586 ntBASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nkx6-1Q99MA9 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nkx6-1Q99MA9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms