Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Gm11591-201ENSMUST00000120063 702 ntBASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Gm12502-201ENSMUST00000120197 444 ntBASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Gm8227-201ENSMUST00000223306 571 ntBASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Gm22058-201ENSMUST00000083393 310 ntBASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Daam2-202ENSMUST00000224595 1926 ntBASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cstf3Q99LI7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Gm13315-201ENSMUST00000120376 991 ntBASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Gm11597-201ENSMUST00000121423 964 ntBASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Gm9022-201ENSMUST00000182482 992 ntBASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Gm8602-201ENSMUST00000184045 607 ntBASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Gm6007-201ENSMUST00000208170 823 ntBASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Gm45925-201ENSMUST00000218882 744 ntBASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Gm5781-201ENSMUST00000219792 443 ntBASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cstf3Q99LI7 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cstf3Q99LI7 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms