Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rab28Q99KL7 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rab28Q99KL7 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rab28Q99KL7 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rab28Q99KL7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rab28Q99KL7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.93□□□□□ -0.5
Rab28Q99KL7 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rab28Q99KL7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Gm13665-201ENSMUST00000120830 528 ntBASIC11.92□□□□□ -0.5
Rab28Q99KL7 Gm6963-201ENSMUST00000147879 379 ntBASIC11.92□□□□□ -0.5
Rab28Q99KL7 Gm5070-201ENSMUST00000177599 862 ntBASIC11.92□□□□□ -0.5
Rab28Q99KL7 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Gm4034-201ENSMUST00000187674 480 ntBASIC11.92□□□□□ -0.5
Rab28Q99KL7 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.92□□□□□ -0.5
Rab28Q99KL7 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.92□□□□□ -0.5
Rab28Q99KL7 Gzmn-202ENSMUST00000225535 989 ntBASIC11.92□□□□□ -0.5
Rab28Q99KL7 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rab28Q99KL7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Rab28Q99KL7 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Gm23912-201ENSMUST00000104687 87 ntBASIC11.91□□□□□ -0.5
Rab28Q99KL7 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.91□□□□□ -0.5
Rab28Q99KL7 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Rab28Q99KL7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Rprl1-202ENSMUST00000198476 238 ntBASIC11.91□□□□□ -0.5
Rab28Q99KL7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Gm44651-201ENSMUST00000207343 372 ntBASIC11.91□□□□□ -0.5
Rab28Q99KL7 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.91□□□□□ -0.5
Rab28Q99KL7 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rab28Q99KL7 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.91□□□□□ -0.5
Rab28Q99KL7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rab28Q99KL7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms