Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Gm22323-201ENSMUST00000103832 109 ntBASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Gm43438-201ENSMUST00000198133 379 ntBASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdha9Q91Y11 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Gm14644-201ENSMUST00000116671 647 ntBASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Gm14109-201ENSMUST00000118814 309 ntBASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Gm20482-202ENSMUST00000174729 825 ntBASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Gm27046-201ENSMUST00000182160 463 ntBASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Gm8885-201ENSMUST00000189382 598 ntBASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Gm18711-201ENSMUST00000199341 750 ntBASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha9Q91Y11 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.1□□□□□ -0.31
Pcdha9Q91Y11 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha9Q91Y11 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha9Q91Y11 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha9Q91Y11 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdha9Q91Y11 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha9Q91Y11 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdha9Q91Y11 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha9Q91Y11 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdha9Q91Y11 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha9Q91Y11 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdha9Q91Y11 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha9Q91Y11 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdha9Q91Y11 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha9Q91Y11 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms