Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Gm5866-201ENSMUST00000177881 973 ntBASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SfpqQ8VIJ6 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 AC127597.1-201ENSMUST00000225697 5711 ntBASIC13□□□□□ -0.33
SfpqQ8VIJ6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Gm13492-201ENSMUST00000119772 665 ntBASIC13□□□□□ -0.33
SfpqQ8VIJ6 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Gm9022-201ENSMUST00000182482 992 ntBASIC13□□□□□ -0.33
SfpqQ8VIJ6 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Gm38092-201ENSMUST00000195600 653 ntBASIC13□□□□□ -0.33
SfpqQ8VIJ6 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Gm32025-201ENSMUST00000217960 307 ntBASIC13□□□□□ -0.33
SfpqQ8VIJ6 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SfpqQ8VIJ6 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SfpqQ8VIJ6 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SfpqQ8VIJ6 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.99□□□□□ -0.33
SfpqQ8VIJ6 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SfpqQ8VIJ6 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SfpqQ8VIJ6 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SfpqQ8VIJ6 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms