Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Gm18018-201ENSMUST00000198273 408 ntBASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Gm44069-201ENSMUST00000204898 506 ntBASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Gm18473-201ENSMUST00000220543 868 ntBASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Pcdh18Q8VHR0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Gm11978-201ENSMUST00000122315 466 ntBASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.94□□□□□ -0.5
Pcdh18Q8VHR0 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms