Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Gm14130-201ENSMUST00000118417 987 ntBASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Gm13315-201ENSMUST00000120376 991 ntBASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Gm13665-201ENSMUST00000120830 528 ntBASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Gm13570-201ENSMUST00000140763 309 ntBASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Gm11597-201ENSMUST00000121423 964 ntBASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Gm26461-201ENSMUST00000175064 290 ntBASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Gm39404-201ENSMUST00000216350 313 ntBASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ndc1Q8VCB1 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms