Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Gm14832-201ENSMUST00000121289 322 ntBASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Gm24845-201ENSMUST00000158034 109 ntBASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Gm4034-201ENSMUST00000187674 480 ntBASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Gm6621-201ENSMUST00000193251 772 ntBASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Prpf39Q8K2Z2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Prpf39Q8K2Z2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf39Q8K2Z2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms