Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc5Q8CG46 AC138329.2-201ENSMUST00000225579 1842 ntBASIC15.24■□□□□ 0.03
Smc5Q8CG46 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Smc5Q8CG46 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc5Q8CG46 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc5Q8CG46 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Smc5Q8CG46 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Gm15172-201ENSMUST00000118945 1046 ntBASIC15.23■□□□□ 0.03
Smc5Q8CG46 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.23■□□□□ 0.03
Smc5Q8CG46 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC15.23■□□□□ 0.03
Smc5Q8CG46 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Gm10076-201ENSMUST00000073238 384 ntBASIC15.23■□□□□ 0.03
Smc5Q8CG46 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Smc5Q8CG46 Gm5422-201ENSMUST00000050717 2721 ntBASIC15.23■□□□□ 0.03
Smc5Q8CG46 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.22■□□□□ 0.03
Smc5Q8CG46 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Gm12490-201ENSMUST00000120255 560 ntBASIC15.22■□□□□ 0.03
Smc5Q8CG46 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Gm3890-201ENSMUST00000182416 207 ntBASIC15.22■□□□□ 0.03
Smc5Q8CG46 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Gm9794-201ENSMUST00000202370 423 ntBASIC15.22■□□□□ 0.03
Smc5Q8CG46 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc5Q8CG46 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Smc5Q8CG46 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.21■□□□□ 0.03
Smc5Q8CG46 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smc5Q8CG46 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.21■□□□□ 0.03
Smc5Q8CG46 Gm12036-201ENSMUST00000120008 530 ntBASIC15.21■□□□□ 0.03
Smc5Q8CG46 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms