Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nup54Q8BTS4 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Gm25700-201ENSMUST00000177693 110 ntBASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Nup54Q8BTS4 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Rprl1-201ENSMUST00000158050 327 ntBASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Gm26361-201ENSMUST00000158868 186 ntBASIC12.62□□□□□ -0.39
Nup54Q8BTS4 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Gm32999-201ENSMUST00000192693 562 ntBASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Gm45598-202ENSMUST00000210719 986 ntBASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.62□□□□□ -0.39
Nup54Q8BTS4 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nup54Q8BTS4 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms