Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smndc1Q8BGT7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smndc1Q8BGT7 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Smndc1Q8BGT7 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smndc1Q8BGT7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Smndc1Q8BGT7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Smndc1Q8BGT7 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Gm27892-201ENSMUST00000185017 106 ntBASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Smndc1Q8BGT7 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Gm27839-201ENSMUST00000184242 106 ntBASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Gm43438-201ENSMUST00000198133 379 ntBASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Gm5035-201ENSMUST00000215581 927 ntBASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Gm25857-201ENSMUST00000082788 129 ntBASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Cog3-203ENSMUST00000227473 4197 ntBASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Smndc1Q8BGT7 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms