Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim65Q8BFW4 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim65Q8BFW4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim65Q8BFW4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim65Q8BFW4 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim65Q8BFW4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Gm15370-201ENSMUST00000117158 253 ntBASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Gm11531-201ENSMUST00000117614 555 ntBASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Gm13297-201ENSMUST00000120205 934 ntBASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Gm27390-201ENSMUST00000184516 176 ntBASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Gm6013-201ENSMUST00000212264 699 ntBASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Gm5950-201ENSMUST00000213337 772 ntBASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Gm8227-201ENSMUST00000223306 571 ntBASIC13.22□□□□□ -0.29
Trim65Q8BFW4 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim65Q8BFW4 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Gm27501-201ENSMUST00000183599 107 ntBASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim65Q8BFW4 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim65Q8BFW4 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.21□□□□□ -0.3
Trim65Q8BFW4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim65Q8BFW4 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim65Q8BFW4 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Trim65Q8BFW4 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim65Q8BFW4 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim65Q8BFW4 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.21□□□□□ -0.3
Trim65Q8BFW4 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim65Q8BFW4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim65Q8BFW4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim65Q8BFW4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim65Q8BFW4 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.2□□□□□ -0.3
Trim65Q8BFW4 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim65Q8BFW4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim65Q8BFW4 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.2□□□□□ -0.3
Trim65Q8BFW4 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim65Q8BFW4 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim65Q8BFW4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trim65Q8BFW4 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms