Protein–RNA interactions for Protein: Q80SS5

Ifna12, Interferon alpha-12, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna12Q80SS5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Auts2-212ENSMUST00000178555 309 ntBASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Gm6007-201ENSMUST00000208170 823 ntBASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Gm45384-201ENSMUST00000210451 277 ntBASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Gm29705-201ENSMUST00000212598 474 ntBASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Gm32025-201ENSMUST00000217960 307 ntBASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Gm5626-201ENSMUST00000222151 1058 ntBASIC10.04□□□□□ -0.8
Ifna12Q80SS5 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Gm6180-201ENSMUST00000065243 498 ntBASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ifna12Q80SS5 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ifna12Q80SS5 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms