Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rad54bQ6PFE3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rad54bQ6PFE3 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rad54bQ6PFE3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.44□□□□□ -0.42
Rad54bQ6PFE3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rad54bQ6PFE3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rad54bQ6PFE3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.44□□□□□ -0.42
Rad54bQ6PFE3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Gm1335-201ENSMUST00000121653 386 ntBASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Gm9794-201ENSMUST00000202370 423 ntBASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Gm5904-201ENSMUST00000210286 865 ntBASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rad54bQ6PFE3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Gm24830-201ENSMUST00000102024 166 ntBASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Gm12036-201ENSMUST00000120008 530 ntBASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Gm11591-201ENSMUST00000120063 702 ntBASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Gm12502-201ENSMUST00000120197 444 ntBASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Gm12490-201ENSMUST00000120255 560 ntBASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Gm26232-201ENSMUST00000083360 166 ntBASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rad54bQ6PFE3 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rad54bQ6PFE3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rad54bQ6PFE3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rad54bQ6PFE3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms