Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn9aQ62205 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC14.26□□□□□ -0.13
Scn9aQ62205 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.26□□□□□ -0.13
Scn9aQ62205 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn9aQ62205 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn9aQ62205 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC14.25□□□□□ -0.13
Scn9aQ62205 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC14.25□□□□□ -0.13
Scn9aQ62205 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC14.25□□□□□ -0.13
Scn9aQ62205 Gm42433-201ENSMUST00000196806 940 ntBASIC14.25□□□□□ -0.13
Scn9aQ62205 Gm8574-201ENSMUST00000203207 924 ntBASIC14.25□□□□□ -0.13
Scn9aQ62205 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Gm16380-201ENSMUST00000077997 478 ntBASIC14.25□□□□□ -0.13
Scn9aQ62205 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Scn9aQ62205 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.25□□□□□ -0.13
Scn9aQ62205 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.25□□□□□ -0.13
Scn9aQ62205 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
Scn9aQ62205 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.25□□□□□ -0.13
Scn9aQ62205 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
Scn9aQ62205 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scn9aQ62205 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.25□□□□□ -0.13
Scn9aQ62205 Gm11979-201ENSMUST00000119629 743 ntBASIC14.25□□□□□ -0.13
Scn9aQ62205 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Gm9136-201ENSMUST00000193368 454 ntBASIC14.25□□□□□ -0.13
Scn9aQ62205 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.25□□□□□ -0.13
Scn9aQ62205 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scn9aQ62205 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 AC166836.1-201ENSMUST00000219933 1795 ntBASIC14.25□□□□□ -0.13
Scn9aQ62205 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn9aQ62205 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.25□□□□□ -0.13
Scn9aQ62205 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.24□□□□□ -0.13
Scn9aQ62205 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Scn9aQ62205 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Scn9aQ62205 Gm15003-201ENSMUST00000118884 446 ntBASIC14.24□□□□□ -0.13
Scn9aQ62205 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC14.24□□□□□ -0.13
Scn9aQ62205 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Scn9aQ62205 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC14.24□□□□□ -0.13
Scn9aQ62205 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Scn9aQ62205 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.24□□□□□ -0.13
Scn9aQ62205 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 Gm44315-201ENSMUST00000203041 219 ntBASIC14.24□□□□□ -0.13
Scn9aQ62205 Gm4811-201ENSMUST00000220879 1220 ntBASIC14.24□□□□□ -0.13
Scn9aQ62205 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Scn9aQ62205 Gm44056-201ENSMUST00000204623 1427 ntBASIC14.24□□□□□ -0.13
Scn9aQ62205 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Scn9aQ62205 Gm42941-201ENSMUST00000200347 1321 ntBASIC14.24□□□□□ -0.13
Scn9aQ62205 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Scn9aQ62205 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Scn9aQ62205 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn9aQ62205 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Scn9aQ62205 Gm14807-201ENSMUST00000116640 983 ntBASIC14.23□□□□□ -0.13
Scn9aQ62205 Gm12943-201ENSMUST00000119616 210 ntBASIC14.23□□□□□ -0.13
Scn9aQ62205 Gm7150-201ENSMUST00000122032 981 ntBASIC14.23□□□□□ -0.13
Scn9aQ62205 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Scn9aQ62205 Gm42816-201ENSMUST00000198433 325 ntBASIC14.23□□□□□ -0.13
Scn9aQ62205 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC14.23□□□□□ -0.13
Scn9aQ62205 Gm18514-201ENSMUST00000218980 436 ntBASIC14.23□□□□□ -0.13
Scn9aQ62205 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Scn9aQ62205 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Scn9aQ62205 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn9aQ62205 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms