Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps54Q5SPW0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Gm19187-201ENSMUST00000206781 892 ntBASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps54Q5SPW0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Gm13296-201ENSMUST00000117854 997 ntBASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Gm9230-201ENSMUST00000188228 532 ntBASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.79□□□□□ -0.04
Vps54Q5SPW0 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps54Q5SPW0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Gm14130-201ENSMUST00000118417 987 ntBASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Gm14208-201ENSMUST00000119645 678 ntBASIC14.78□□□□□ -0.04
Vps54Q5SPW0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms