Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Gm14999-201ENSMUST00000121039 624 ntBASIC14.04□□□□□ -0.16
Gm28047Q3US59 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.04□□□□□ -0.16
Gm28047Q3US59 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Gm42937-201ENSMUST00000197360 752 ntBASIC14.04□□□□□ -0.16
Gm28047Q3US59 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.04□□□□□ -0.16
Gm28047Q3US59 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Gm28047Q3US59 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Gm23931-201ENSMUST00000103842 109 ntBASIC14.03□□□□□ -0.16
Gm28047Q3US59 Gm22018-201ENSMUST00000104357 131 ntBASIC14.03□□□□□ -0.16
Gm28047Q3US59 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Mir1247-201ENSMUST00000116706 82 ntBASIC14.03□□□□□ -0.16
Gm28047Q3US59 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Gm13570-201ENSMUST00000140763 309 ntBASIC14.03□□□□□ -0.16
Gm28047Q3US59 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Gm37201-201ENSMUST00000191845 523 ntBASIC14.03□□□□□ -0.16
Gm28047Q3US59 Gm37008-201ENSMUST00000195712 319 ntBASIC14.03□□□□□ -0.16
Gm28047Q3US59 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.03□□□□□ -0.16
Gm28047Q3US59 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Gm28047Q3US59 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Gm28047Q3US59 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.03□□□□□ -0.16
Gm28047Q3US59 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm28047Q3US59 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Gm28047Q3US59 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28047Q3US59 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28047Q3US59 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28047Q3US59 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28047Q3US59 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28047Q3US59 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28047Q3US59 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.02□□□□□ -0.16
Gm28047Q3US59 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28047Q3US59 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Gm28047Q3US59 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28047Q3US59 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28047Q3US59 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28047Q3US59 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm28047Q3US59 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Gm11425-201ENSMUST00000119608 498 ntBASIC14.02□□□□□ -0.17
Gm28047Q3US59 Gm13875-201ENSMUST00000120162 282 ntBASIC14.02□□□□□ -0.17
Gm28047Q3US59 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.02□□□□□ -0.17
Gm28047Q3US59 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gm28047Q3US59 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Gm28047Q3US59 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms