Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg7Q3ULF4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg7Q3ULF4 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Spg7Q3ULF4 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Spg7Q3ULF4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg7Q3ULF4 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Spg7Q3ULF4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg7Q3ULF4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Spg7Q3ULF4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.68□□□□□ -0.06
Spg7Q3ULF4 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg7Q3ULF4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Spg7Q3ULF4 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Gm14058-201ENSMUST00000116082 735 ntBASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Gm12196-201ENSMUST00000120954 262 ntBASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Gm44882-201ENSMUST00000205702 802 ntBASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Gm4607-201ENSMUST00000206649 577 ntBASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Gm4157-201ENSMUST00000211647 679 ntBASIC14.67□□□□□ -0.06
Spg7Q3ULF4 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Spg7Q3ULF4 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Gm22334-201ENSMUST00000158070 133 ntBASIC14.66□□□□□ -0.06
Spg7Q3ULF4 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Gm9630-201ENSMUST00000178304 885 ntBASIC14.66□□□□□ -0.06
Spg7Q3ULF4 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Gm8343-201ENSMUST00000182705 994 ntBASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.66□□□□□ -0.06
Spg7Q3ULF4 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Gm5369-201ENSMUST00000217499 588 ntBASIC14.66□□□□□ -0.06
Spg7Q3ULF4 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Gm807-202ENSMUST00000224929 408 ntBASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Spg7Q3ULF4 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Spg7Q3ULF4 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Spg7Q3ULF4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Spg7Q3ULF4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Spg7Q3ULF4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Spg7Q3ULF4 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Spg7Q3ULF4 Gm11941-201ENSMUST00000119904 610 ntBASIC14.65□□□□□ -0.06
Spg7Q3ULF4 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.65□□□□□ -0.06
Spg7Q3ULF4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.65□□□□□ -0.06
Spg7Q3ULF4 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Spg7Q3ULF4 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.65□□□□□ -0.06
Spg7Q3ULF4 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Spg7Q3ULF4 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Spg7Q3ULF4 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Spg7Q3ULF4 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Spg7Q3ULF4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Spg7Q3ULF4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Spg7Q3ULF4 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Spg7Q3ULF4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms