Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.21□□□□□ -0.61
Lsm3P62311 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Lsm3P62311 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm3P62311 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm3P62311 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm3P62311 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.21□□□□□ -0.61
Lsm3P62311 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm3P62311 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm3P62311 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm3P62311 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Lsm3P62311 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm3P62311 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm3P62311 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm3P62311 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm3P62311 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Lsm3P62311 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Lsm3P62311 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm3P62311 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Lsm3P62311 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm3P62311 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.21□□□□□ -0.61
Lsm3P62311 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.21□□□□□ -0.61
Lsm3P62311 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm3P62311 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm3P62311 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.21□□□□□ -0.61
Lsm3P62311 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Lsm3P62311 Mir339-201ENSMUST00000083659 96 ntBASIC11.21□□□□□ -0.61
Lsm3P62311 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Lsm3P62311 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lsm3P62311 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm3P62311 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
Lsm3P62311 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.21□□□□□ -0.62
Lsm3P62311 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm3P62311 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
Lsm3P62311 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm3P62311 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.21□□□□□ -0.62
Lsm3P62311 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Lsm3P62311 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm3P62311 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm3P62311 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm3P62311 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm3P62311 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Lsm3P62311 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Lsm3P62311 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lsm3P62311 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Lsm3P62311 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.2□□□□□ -0.62
Lsm3P62311 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.2□□□□□ -0.62
Lsm3P62311 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Lsm3P62311 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Gm14494-201ENSMUST00000118786 435 ntBASIC11.2□□□□□ -0.62
Lsm3P62311 Gm12291-201ENSMUST00000121627 311 ntBASIC11.2□□□□□ -0.62
Lsm3P62311 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.2□□□□□ -0.62
Lsm3P62311 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.2□□□□□ -0.62
Lsm3P62311 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.2□□□□□ -0.62
Lsm3P62311 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Gm42550-201ENSMUST00000201553 960 ntBASIC11.2□□□□□ -0.62
Lsm3P62311 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.2□□□□□ -0.62
Lsm3P62311 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Lsm3P62311 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.2□□□□□ -0.62
Lsm3P62311 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Lsm3P62311 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lsm3P62311 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Lsm3P62311 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.2□□□□□ -0.62
Lsm3P62311 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.19□□□□□ -0.62
Lsm3P62311 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms