Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Nup43P59235 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nup43P59235 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nup43P59235 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.67□□□□□ -0.54
Nup43P59235 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Gm23270-201ENSMUST00000104055 131 ntBASIC11.67□□□□□ -0.54
Nup43P59235 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Nup43P59235 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.67□□□□□ -0.54
Nup43P59235 Gm14832-201ENSMUST00000121289 322 ntBASIC11.67□□□□□ -0.54
Nup43P59235 Gm15547-201ENSMUST00000122152 333 ntBASIC11.67□□□□□ -0.54
Nup43P59235 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC11.67□□□□□ -0.54
Nup43P59235 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Nup43P59235 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Gm43758-201ENSMUST00000199500 367 ntBASIC11.67□□□□□ -0.54
Nup43P59235 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nup43P59235 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.67□□□□□ -0.54
Nup43P59235 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Nup43P59235 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nup43P59235 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nup43P59235 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Nup43P59235 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nup43P59235 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Nup43P59235 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Nup43P59235 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.66□□□□□ -0.54
Nup43P59235 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.66□□□□□ -0.54
Nup43P59235 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Gm14381-201ENSMUST00000122105 414 ntBASIC11.66□□□□□ -0.54
Nup43P59235 Gm24845-201ENSMUST00000158034 109 ntBASIC11.66□□□□□ -0.54
Nup43P59235 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Nup43P59235 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.66□□□□□ -0.54
Nup43P59235 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.66□□□□□ -0.54
Nup43P59235 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.66□□□□□ -0.54
Nup43P59235 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Nup43P59235 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Nup43P59235 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Nup43P59235 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Nup43P59235 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nup43P59235 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Nup43P59235 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.65□□□□□ -0.54
Nup43P59235 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.65□□□□□ -0.54
Nup43P59235 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.65□□□□□ -0.54
Nup43P59235 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Nup43P59235 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Nup43P59235 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nup43P59235 Gm24255-201ENSMUST00000104481 128 ntBASIC11.65□□□□□ -0.54
Nup43P59235 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms