Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Lhx3P50481 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Lhx3P50481 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lhx3P50481 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.49□□□□□ -0.41
Lhx3P50481 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.49□□□□□ -0.41
Lhx3P50481 Gm15236-201ENSMUST00000117309 379 ntBASIC12.49□□□□□ -0.41
Lhx3P50481 Gm7722-201ENSMUST00000120646 741 ntBASIC12.49□□□□□ -0.41
Lhx3P50481 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.49□□□□□ -0.41
Lhx3P50481 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.49□□□□□ -0.41
Lhx3P50481 Gm2383-201ENSMUST00000181461 807 ntBASIC12.49□□□□□ -0.41
Lhx3P50481 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.49□□□□□ -0.41
Lhx3P50481 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lhx3P50481 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.49□□□□□ -0.41
Lhx3P50481 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Lhx3P50481 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lhx3P50481 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lhx3P50481 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.48□□□□□ -0.41
Lhx3P50481 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Lhx3P50481 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lhx3P50481 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.48□□□□□ -0.41
Lhx3P50481 Gm14247-201ENSMUST00000120950 237 ntBASIC12.48□□□□□ -0.41
Lhx3P50481 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.48□□□□□ -0.41
Lhx3P50481 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.48□□□□□ -0.41
Lhx3P50481 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.48□□□□□ -0.41
Lhx3P50481 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.48□□□□□ -0.41
Lhx3P50481 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.48□□□□□ -0.41
Lhx3P50481 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.48□□□□□ -0.41
Lhx3P50481 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Lhx3P50481 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.48□□□□□ -0.41
Lhx3P50481 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lhx3P50481 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.47□□□□□ -0.41
Lhx3P50481 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lhx3P50481 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Lhx3P50481 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.47□□□□□ -0.41
Lhx3P50481 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Lhx3P50481 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lhx3P50481 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms