Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Nedd4P46935 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nedd4P46935 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd4P46935 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd4P46935 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.82□□□□□ -0.04
Nedd4P46935 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd4P46935 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd4P46935 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nedd4P46935 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd4P46935 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd4P46935 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Nedd4P46935 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nedd4P46935 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nedd4P46935 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 Gm25076-201ENSMUST00000104098 132 ntBASIC14.81□□□□□ -0.04
Nedd4P46935 Gm8731-201ENSMUST00000118088 412 ntBASIC14.81□□□□□ -0.04
Nedd4P46935 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.81□□□□□ -0.04
Nedd4P46935 Gm11836-201ENSMUST00000121022 441 ntBASIC14.81□□□□□ -0.04
Nedd4P46935 Gm12783-201ENSMUST00000121425 397 ntBASIC14.81□□□□□ -0.04
Nedd4P46935 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.81□□□□□ -0.04
Nedd4P46935 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Nedd4P46935 Ighv2-1-201ENSMUST00000170946 353 ntBASIC14.81□□□□□ -0.04
Nedd4P46935 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC14.81□□□□□ -0.04
Nedd4P46935 Gm3551-201ENSMUST00000190750 664 ntBASIC14.81□□□□□ -0.04
Nedd4P46935 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.81□□□□□ -0.04
Nedd4P46935 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC14.81□□□□□ -0.04
Nedd4P46935 CT030653.1-201ENSMUST00000224382 1279 ntBASIC14.81□□□□□ -0.04
Nedd4P46935 CT009536.2-201ENSMUST00000225370 665 ntBASIC14.81□□□□□ -0.04
Nedd4P46935 AC102368.1-201ENSMUST00000227161 892 ntBASIC14.81□□□□□ -0.04
Nedd4P46935 AC122350.1-201ENSMUST00000228135 533 ntBASIC14.81□□□□□ -0.04
Nedd4P46935 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nedd4P46935 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nedd4P46935 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.81□□□□□ -0.04
Nedd4P46935 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nedd4P46935 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.81□□□□□ -0.04
Nedd4P46935 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nedd4P46935 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd4P46935 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd4P46935 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd4P46935 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Nedd4P46935 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd4P46935 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nedd4P46935 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Nedd4P46935 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nedd4P46935 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd4P46935 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC14.8□□□□□ -0.04
Nedd4P46935 Gm24398-201ENSMUST00000157870 109 ntBASIC14.8□□□□□ -0.04
Nedd4P46935 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC14.8□□□□□ -0.04
Nedd4P46935 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd4P46935 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC14.8□□□□□ -0.04
Nedd4P46935 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nedd4P46935 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd4P46935 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd4P46935 Ap3s1-202ENSMUST00000224622 978 ntBASIC14.8□□□□□ -0.04
Nedd4P46935 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd4P46935 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd4P46935 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nedd4P46935 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd4P46935 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd4P46935 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Nedd4P46935 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd4P46935 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd4P46935 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nedd4P46935 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd4P46935 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nedd4P46935 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd4P46935 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nedd4P46935 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd4P46935 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd4P46935 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd4P46935 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nedd4P46935 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd4P46935 Gm24231-201ENSMUST00000104315 133 ntBASIC14.79□□□□□ -0.04
Nedd4P46935 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd4P46935 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nedd4P46935 Gm15784-201ENSMUST00000120260 1462 ntBASIC14.79□□□□□ -0.04
Nedd4P46935 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.79□□□□□ -0.04
Nedd4P46935 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC14.79□□□□□ -0.04
Nedd4P46935 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.79□□□□□ -0.04
Nedd4P46935 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd4P46935 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nedd4P46935 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 114.6 ms