Protein–RNA interactions for Protein: P31245

Hoxa2, Homeobox protein Hox-A2, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa2P31245 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa2P31245 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hoxa2P31245 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa2P31245 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa2P31245 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Hoxa2P31245 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa2P31245 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa2P31245 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa2P31245 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.79□□□□□ -0.36
Hoxa2P31245 Gm7647-201ENSMUST00000200996 1389 ntBASIC12.79□□□□□ -0.36
Hoxa2P31245 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.79□□□□□ -0.36
Hoxa2P31245 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa2P31245 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa2P31245 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hoxa2P31245 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxa2P31245 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hoxa2P31245 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Hoxa2P31245 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxa2P31245 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Hoxa2P31245 Gm13674-201ENSMUST00000121276 823 ntBASIC12.78□□□□□ -0.36
Hoxa2P31245 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC12.78□□□□□ -0.36
Hoxa2P31245 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Gm26185-201ENSMUST00000157692 266 ntBASIC12.78□□□□□ -0.36
Hoxa2P31245 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hoxa2P31245 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC12.78□□□□□ -0.36
Hoxa2P31245 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxa2P31245 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxa2P31245 Gm37934-201ENSMUST00000192902 402 ntBASIC12.78□□□□□ -0.36
Hoxa2P31245 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.78□□□□□ -0.36
Hoxa2P31245 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Hoxa2P31245 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.78□□□□□ -0.36
Hoxa2P31245 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Hoxa2P31245 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Hoxa2P31245 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxa2P31245 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hoxa2P31245 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa2P31245 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa2P31245 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa2P31245 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa2P31245 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa2P31245 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa2P31245 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa2P31245 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa2P31245 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa2P31245 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa2P31245 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa2P31245 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa2P31245 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa2P31245 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxa2P31245 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxa2P31245 Gm44090-201ENSMUST00000204669 1834 ntBASIC12.77□□□□□ -0.37
Hoxa2P31245 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Hoxa2P31245 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxa2P31245 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.77□□□□□ -0.37
Hoxa2P31245 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxa2P31245 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Hoxa2P31245 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxa2P31245 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Hoxa2P31245 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxa2P31245 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxa2P31245 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Hoxa2P31245 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.77□□□□□ -0.37
Hoxa2P31245 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxa2P31245 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.77□□□□□ -0.37
Hoxa2P31245 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.77□□□□□ -0.37
Hoxa2P31245 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxa2P31245 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Hoxa2P31245 Snora73a-201ENSMUST00000082453 205 ntBASIC12.77□□□□□ -0.37
Hoxa2P31245 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Hoxa2P31245 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Hoxa2P31245 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Hoxa2P31245 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxa2P31245 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms