Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.68□□□□□ -0.22
Hoxc6P10629 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hoxc6P10629 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.68□□□□□ -0.22
Hoxc6P10629 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hoxc6P10629 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hoxc6P10629 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hoxc6P10629 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.67□□□□□ -0.22
Hoxc6P10629 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Gm12795-201ENSMUST00000117594 539 ntBASIC13.67□□□□□ -0.22
Hoxc6P10629 Gm7722-201ENSMUST00000120646 741 ntBASIC13.67□□□□□ -0.22
Hoxc6P10629 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hoxc6P10629 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.67□□□□□ -0.22
Hoxc6P10629 Gm18711-201ENSMUST00000199341 750 ntBASIC13.67□□□□□ -0.22
Hoxc6P10629 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.67□□□□□ -0.22
Hoxc6P10629 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.67□□□□□ -0.22
Hoxc6P10629 Snora73b-201ENSMUST00000083419 205 ntBASIC13.67□□□□□ -0.22
Hoxc6P10629 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Hoxc6P10629 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hoxc6P10629 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.67□□□□□ -0.22
Hoxc6P10629 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hoxc6P10629 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hoxc6P10629 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Hoxc6P10629 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.67□□□□□ -0.22
Hoxc6P10629 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.67□□□□□ -0.22
Hoxc6P10629 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.67□□□□□ -0.22
Hoxc6P10629 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hoxc6P10629 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Hoxc6P10629 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc6P10629 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc6P10629 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Hoxc6P10629 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hoxc6P10629 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc6P10629 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc6P10629 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc6P10629 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.66□□□□□ -0.22
Hoxc6P10629 Gm14585-201ENSMUST00000120713 634 ntBASIC13.66□□□□□ -0.22
Hoxc6P10629 Gm15595-201ENSMUST00000120840 961 ntBASIC13.66□□□□□ -0.22
Hoxc6P10629 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.66□□□□□ -0.22
Hoxc6P10629 Gm7666-201ENSMUST00000146631 819 ntBASIC13.66□□□□□ -0.22
Hoxc6P10629 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc6P10629 Gm22144-201ENSMUST00000157402 102 ntBASIC13.66□□□□□ -0.22
Hoxc6P10629 Gm22138-201ENSMUST00000158748 128 ntBASIC13.66□□□□□ -0.22
Hoxc6P10629 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc6P10629 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.66□□□□□ -0.22
Hoxc6P10629 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.66□□□□□ -0.22
Hoxc6P10629 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.66□□□□□ -0.22
Hoxc6P10629 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc6P10629 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc6P10629 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.66□□□□□ -0.22
Hoxc6P10629 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc6P10629 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hoxc6P10629 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Hoxc6P10629 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hoxc6P10629 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Hoxc6P10629 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Hoxc6P10629 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc6P10629 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc6P10629 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc6P10629 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc6P10629 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.66□□□□□ -0.22
Hoxc6P10629 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hoxc6P10629 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc6P10629 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.65□□□□□ -0.22
Hoxc6P10629 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc6P10629 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc6P10629 Mir1901-201ENSMUST00000122616 78 ntBASIC13.65□□□□□ -0.22
Hoxc6P10629 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc6P10629 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.65□□□□□ -0.22
Hoxc6P10629 Mir6958-201ENSMUST00000184207 73 ntBASIC13.65□□□□□ -0.22
Hoxc6P10629 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc6P10629 Gm38210-201ENSMUST00000191944 809 ntBASIC13.65□□□□□ -0.22
Hoxc6P10629 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxc6P10629 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.65□□□□□ -0.22
Hoxc6P10629 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.65□□□□□ -0.22
Hoxc6P10629 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms