Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.48□□□□□ -0.25
Chmp6P0C0A3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Chmp6P0C0A3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Gm15198-201ENSMUST00000117283 177 ntBASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Gm13786-201ENSMUST00000122371 333 ntBASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Gm38266-201ENSMUST00000194931 421 ntBASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Gm43179-201ENSMUST00000198797 275 ntBASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp6P0C0A3 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Chmp6P0C0A3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp6P0C0A3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp6P0C0A3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp6P0C0A3 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp6P0C0A3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp6P0C0A3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp6P0C0A3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp6P0C0A3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp6P0C0A3 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp6P0C0A3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp6P0C0A3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp6P0C0A3 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp6P0C0A3 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chmp6P0C0A3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.46□□□□□ -0.26
Chmp6P0C0A3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chmp6P0C0A3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms