Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.69□□□□□ -0.54
ApoeP08226 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ApoeP08226 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
ApoeP08226 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
ApoeP08226 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
ApoeP08226 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
ApoeP08226 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.68□□□□□ -0.54
ApoeP08226 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
ApoeP08226 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.68□□□□□ -0.54
ApoeP08226 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
ApoeP08226 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.68□□□□□ -0.54
ApoeP08226 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
ApoeP08226 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.68□□□□□ -0.54
ApoeP08226 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.68□□□□□ -0.54
ApoeP08226 Gm26185-201ENSMUST00000157692 266 ntBASIC11.68□□□□□ -0.54
ApoeP08226 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.68□□□□□ -0.54
ApoeP08226 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
ApoeP08226 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.68□□□□□ -0.54
ApoeP08226 Gm27331-201ENSMUST00000183705 60 ntBASIC11.68□□□□□ -0.54
ApoeP08226 Gm4034-201ENSMUST00000187674 480 ntBASIC11.68□□□□□ -0.54
ApoeP08226 Gm37922-201ENSMUST00000195596 455 ntBASIC11.68□□□□□ -0.54
ApoeP08226 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.68□□□□□ -0.54
ApoeP08226 Gm6218-201ENSMUST00000219812 628 ntBASIC11.68□□□□□ -0.54
ApoeP08226 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.68□□□□□ -0.54
ApoeP08226 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.68□□□□□ -0.54
ApoeP08226 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.68□□□□□ -0.54
ApoeP08226 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
ApoeP08226 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.68□□□□□ -0.54
ApoeP08226 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
ApoeP08226 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.68□□□□□ -0.54
ApoeP08226 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
ApoeP08226 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ApoeP08226 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.68□□□□□ -0.54
ApoeP08226 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.67□□□□□ -0.54
ApoeP08226 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
ApoeP08226 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
ApoeP08226 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.67□□□□□ -0.54
ApoeP08226 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.67□□□□□ -0.54
ApoeP08226 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.67□□□□□ -0.54
ApoeP08226 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.67□□□□□ -0.54
ApoeP08226 Gm2231-201ENSMUST00000125661 612 ntBASIC11.67□□□□□ -0.54
ApoeP08226 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Gm16215-201ENSMUST00000161990 637 ntBASIC11.67□□□□□ -0.54
ApoeP08226 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.67□□□□□ -0.54
ApoeP08226 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.67□□□□□ -0.54
ApoeP08226 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.67□□□□□ -0.54
ApoeP08226 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.67□□□□□ -0.54
ApoeP08226 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
ApoeP08226 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.67□□□□□ -0.54
ApoeP08226 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
ApoeP08226 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.67□□□□□ -0.54
ApoeP08226 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.67□□□□□ -0.54
ApoeP08226 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ApoeP08226 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.67□□□□□ -0.54
ApoeP08226 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms