Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC14.88□□□□□ -0.03
Col4a1P02463 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col4a1P02463 Gm3551-201ENSMUST00000190750 664 ntBASIC14.88□□□□□ -0.03
Col4a1P02463 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC14.88□□□□□ -0.03
Col4a1P02463 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC14.88□□□□□ -0.03
Col4a1P02463 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col4a1P02463 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col4a1P02463 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col4a1P02463 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.87□□□□□ -0.03
Col4a1P02463 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col4a1P02463 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col4a1P02463 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC14.87□□□□□ -0.03
Col4a1P02463 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC14.87□□□□□ -0.03
Col4a1P02463 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC14.87□□□□□ -0.03
Col4a1P02463 Gm25072-201ENSMUST00000175233 235 ntBASIC14.87□□□□□ -0.03
Col4a1P02463 Gm28937-201ENSMUST00000185413 695 ntBASIC14.87□□□□□ -0.03
Col4a1P02463 Gm29400-201ENSMUST00000187208 695 ntBASIC14.87□□□□□ -0.03
Col4a1P02463 Gm28662-201ENSMUST00000188446 695 ntBASIC14.87□□□□□ -0.03
Col4a1P02463 Gm28251-201ENSMUST00000188835 695 ntBASIC14.87□□□□□ -0.03
Col4a1P02463 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC14.87□□□□□ -0.03
Col4a1P02463 Gm37318-201ENSMUST00000194325 695 ntBASIC14.87□□□□□ -0.03
Col4a1P02463 Gm38017-201ENSMUST00000194768 695 ntBASIC14.87□□□□□ -0.03
Col4a1P02463 Gm37287-201ENSMUST00000195449 695 ntBASIC14.87□□□□□ -0.03
Col4a1P02463 Gm37793-201ENSMUST00000195548 695 ntBASIC14.87□□□□□ -0.03
Col4a1P02463 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.87□□□□□ -0.03
Col4a1P02463 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.87□□□□□ -0.03
Col4a1P02463 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.87□□□□□ -0.03
Col4a1P02463 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.87□□□□□ -0.03
Col4a1P02463 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Col4a1P02463 Gm13347-201ENSMUST00000120298 1353 ntBASIC14.87□□□□□ -0.03
Col4a1P02463 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.87□□□□□ -0.03
Col4a1P02463 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.87□□□□□ -0.03
Col4a1P02463 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Gm18198-201ENSMUST00000204986 1551 ntBASIC14.87□□□□□ -0.03
Col4a1P02463 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.87□□□□□ -0.03
Col4a1P02463 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.87□□□□□ -0.03
Col4a1P02463 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.87□□□□□ -0.03
Col4a1P02463 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC14.87□□□□□ -0.03
Col4a1P02463 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Gm5100-201ENSMUST00000195631 589 ntBASIC14.87□□□□□ -0.03
Col4a1P02463 CT485606.1-201ENSMUST00000213187 878 ntBASIC14.87□□□□□ -0.03
Col4a1P02463 Gm3619-201ENSMUST00000219947 775 ntBASIC14.87□□□□□ -0.03
Col4a1P02463 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.87□□□□□ -0.03
Col4a1P02463 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC14.87□□□□□ -0.03
Col4a1P02463 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col4a1P02463 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a1P02463 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.86□□□□□ -0.03
Col4a1P02463 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a1P02463 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a1P02463 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a1P02463 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a1P02463 Gm13384-201ENSMUST00000117166 1344 ntBASIC14.86□□□□□ -0.03
Col4a1P02463 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Col4a1P02463 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.86□□□□□ -0.03
Col4a1P02463 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a1P02463 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Col4a1P02463 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col4a1P02463 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a1P02463 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a1P02463 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.86□□□□□ -0.03
Col4a1P02463 Gm13668-201ENSMUST00000119237 1001 ntBASIC14.86□□□□□ -0.03
Col4a1P02463 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC14.86□□□□□ -0.03
Col4a1P02463 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col4a1P02463 Gm3671-201ENSMUST00000182463 1007 ntBASIC14.86□□□□□ -0.03
Col4a1P02463 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.86□□□□□ -0.03
Col4a1P02463 Gm44124-201ENSMUST00000204159 472 ntBASIC14.86□□□□□ -0.03
Col4a1P02463 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.86□□□□□ -0.03
Col4a1P02463 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.86□□□□□ -0.03
Col4a1P02463 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms