Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.32□□□□□ -0.6
P01852 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.32□□□□□ -0.6
P01852 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
P01852 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
P01852 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.32□□□□□ -0.6
P01852 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.32□□□□□ -0.6
P01852 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
P01852 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.32□□□□□ -0.6
P01852 Gm11531-201ENSMUST00000117614 555 ntBASIC11.32□□□□□ -0.6
P01852 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
P01852 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.32□□□□□ -0.6
P01852 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.32□□□□□ -0.6
P01852 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Gm30285-201ENSMUST00000214614 422 ntBASIC11.32□□□□□ -0.6
P01852 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.32□□□□□ -0.6
P01852 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
P01852 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
P01852 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
P01852 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.32□□□□□ -0.6
P01852 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
P01852 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01852 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
P01852 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.31□□□□□ -0.6
P01852 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.31□□□□□ -0.6
P01852 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.31□□□□□ -0.6
P01852 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.31□□□□□ -0.6
P01852 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Gm12314-201ENSMUST00000118104 538 ntBASIC11.31□□□□□ -0.6
P01852 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.31□□□□□ -0.6
P01852 Gm14726-201ENSMUST00000120623 896 ntBASIC11.31□□□□□ -0.6
P01852 Gm11597-201ENSMUST00000121423 964 ntBASIC11.31□□□□□ -0.6
P01852 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.31□□□□□ -0.6
P01852 Gm14381-201ENSMUST00000122105 414 ntBASIC11.31□□□□□ -0.6
P01852 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.31□□□□□ -0.6
P01852 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.31□□□□□ -0.6
P01852 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.31□□□□□ -0.6
P01852 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.31□□□□□ -0.6
P01852 Mir6420-201ENSMUST00000185032 102 ntBASIC11.31□□□□□ -0.6
P01852 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.31□□□□□ -0.6
P01852 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Gm5950-201ENSMUST00000213337 772 ntBASIC11.31□□□□□ -0.6
P01852 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.31□□□□□ -0.6
P01852 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.31□□□□□ -0.6
P01852 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.31□□□□□ -0.6
P01852 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
P01852 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.31□□□□□ -0.6
P01852 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.31□□□□□ -0.6
P01852 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.31□□□□□ -0.6
P01852 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.31□□□□□ -0.6
P01852 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
P01852 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01852 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
P01852 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01852 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01852 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P01852 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01852 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
P01852 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01852 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01852 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms