Protein–RNA interactions for Protein: P01798

Ig heavy chain V-III region E109, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01798 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.58□□□□□ -0.72
P01798 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01798 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01798 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01798 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01798 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
P01798 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
P01798 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P01798 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.58□□□□□ -0.72
P01798 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01798 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01798 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01798 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
P01798 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P01798 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.58□□□□□ -0.72
P01798 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
P01798 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.57□□□□□ -0.72
P01798 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
P01798 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.57□□□□□ -0.72
P01798 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.57□□□□□ -0.72
P01798 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.57□□□□□ -0.72
P01798 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Daam2-202ENSMUST00000224595 1926 ntBASIC10.57□□□□□ -0.72
P01798 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.57□□□□□ -0.72
P01798 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Gm37489-201ENSMUST00000191883 159 ntBASIC10.57□□□□□ -0.72
P01798 Gm7783-201ENSMUST00000204795 781 ntBASIC10.57□□□□□ -0.72
P01798 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.57□□□□□ -0.72
P01798 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.57□□□□□ -0.72
P01798 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
P01798 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.57□□□□□ -0.72
P01798 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.57□□□□□ -0.72
P01798 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
P01798 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
P01798 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
P01798 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.57□□□□□ -0.72
P01798 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.57□□□□□ -0.72
P01798 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01798 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.57□□□□□ -0.72
P01798 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01798 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01798 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01798 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01798 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
P01798 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01798 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01798 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01798 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01798 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01798 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01798 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01798 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01798 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01798 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
P01798 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.56□□□□□ -0.72
P01798 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01798 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01798 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01798 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01798 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.56□□□□□ -0.72
P01798 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.56□□□□□ -0.72
P01798 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.56□□□□□ -0.72
P01798 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms