Protein–RNA interactions for Protein: P01680

Ig kappa chain V-IV region S107B, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01680 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P01680 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P01680 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.96□□□□□ -0.65
P01680 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01680 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.96□□□□□ -0.65
P01680 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01680 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01680 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.96□□□□□ -0.65
P01680 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.96□□□□□ -0.65
P01680 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
P01680 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
P01680 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.96□□□□□ -0.65
P01680 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P01680 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
P01680 Gm5419-201ENSMUST00000119301 527 ntBASIC10.96□□□□□ -0.65
P01680 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.96□□□□□ -0.65
P01680 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.96□□□□□ -0.65
P01680 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.96□□□□□ -0.65
P01680 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.96□□□□□ -0.65
P01680 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P01680 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
P01680 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.96□□□□□ -0.65
P01680 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.96□□□□□ -0.65
P01680 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.65
P01680 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
P01680 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.96□□□□□ -0.65
P01680 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01680 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01680 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01680 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
P01680 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.96□□□□□ -0.65
P01680 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
P01680 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01680 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
P01680 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01680 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01680 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
P01680 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.96□□□□□ -0.66
P01680 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01680 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
P01680 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01680 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01680 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
P01680 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01680 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
P01680 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
P01680 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.95□□□□□ -0.66
P01680 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.95□□□□□ -0.66
P01680 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.95□□□□□ -0.66
P01680 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
P01680 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
P01680 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.95□□□□□ -0.66
P01680 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
P01680 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.95□□□□□ -0.66
P01680 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Gm8343-201ENSMUST00000182705 994 ntBASIC10.95□□□□□ -0.66
P01680 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.95□□□□□ -0.66
P01680 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.95□□□□□ -0.66
P01680 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.95□□□□□ -0.66
P01680 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.95□□□□□ -0.66
P01680 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.95□□□□□ -0.66
P01680 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
P01680 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.95□□□□□ -0.66
P01680 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.95□□□□□ -0.66
P01680 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.95□□□□□ -0.66
P01680 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
P01680 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
P01680 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P01680 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
P01680 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
P01680 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
P01680 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P01680 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
P01680 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
P01680 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms