Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vti1aO89116 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Vti1aO89116 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vti1aO89116 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Vti1aO89116 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.36□□□□□ -0.27
Vti1aO89116 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Vti1aO89116 Gm7857-201ENSMUST00000117957 358 ntBASIC13.36□□□□□ -0.27
Vti1aO89116 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.36□□□□□ -0.27
Vti1aO89116 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Gm8885-201ENSMUST00000189382 598 ntBASIC13.36□□□□□ -0.27
Vti1aO89116 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.36□□□□□ -0.27
Vti1aO89116 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.36□□□□□ -0.27
Vti1aO89116 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.36□□□□□ -0.27
Vti1aO89116 Gzmn-202ENSMUST00000225535 989 ntBASIC13.36□□□□□ -0.27
Vti1aO89116 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Vti1aO89116 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Vti1aO89116 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Vti1aO89116 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.36□□□□□ -0.27
Vti1aO89116 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Vti1aO89116 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.36□□□□□ -0.27
Vti1aO89116 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vti1aO89116 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Vti1aO89116 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.35□□□□□ -0.27
Vti1aO89116 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Vti1aO89116 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vti1aO89116 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.35□□□□□ -0.27
Vti1aO89116 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.35□□□□□ -0.27
Vti1aO89116 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.35□□□□□ -0.27
Vti1aO89116 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.35□□□□□ -0.27
Vti1aO89116 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.35□□□□□ -0.27
Vti1aO89116 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.35□□□□□ -0.27
Vti1aO89116 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vti1aO89116 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.35□□□□□ -0.27
Vti1aO89116 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.35□□□□□ -0.27
Vti1aO89116 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.35□□□□□ -0.27
Vti1aO89116 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.35□□□□□ -0.27
Vti1aO89116 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.35□□□□□ -0.27
Vti1aO89116 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Vti1aO89116 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vti1aO89116 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vti1aO89116 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms