Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Gm10109-202ENSMUST00000206890 1211 ntBASIC15.04■□□□□ -0
Cops6O88545 Gm45770-201ENSMUST00000212105 616 ntBASIC15.04■□□□□ -0
Cops6O88545 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Cops6O88545 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cops6O88545 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cops6O88545 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cops6O88545 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops6O88545 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cops6O88545 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops6O88545 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cops6O88545 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops6O88545 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cops6O88545 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cops6O88545 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cops6O88545 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cops6O88545 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops6O88545 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Cops6O88545 Gm9072-201ENSMUST00000218390 1514 ntBASIC15.03■□□□□ -0
Cops6O88545 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cops6O88545 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cops6O88545 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC15.03■□□□□ -0
Cops6O88545 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC15.03■□□□□ -0
Cops6O88545 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops6O88545 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops6O88545 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC15.03■□□□□ -0
Cops6O88545 Gm12857-201ENSMUST00000117678 592 ntBASIC15.03■□□□□ -0
Cops6O88545 Cd63-ps-202ENSMUST00000154992 717 ntBASIC15.03■□□□□ -0
Cops6O88545 Gm7467-201ENSMUST00000185173 652 ntBASIC15.03■□□□□ -0
Cops6O88545 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC15.03■□□□□ -0
Cops6O88545 Gm42629-201ENSMUST00000199063 1102 ntBASIC15.03■□□□□ -0
Cops6O88545 Gm44882-201ENSMUST00000205702 802 ntBASIC15.03■□□□□ -0
Cops6O88545 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC15.03■□□□□ -0
Cops6O88545 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops6O88545 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cops6O88545 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cops6O88545 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cops6O88545 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops6O88545 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops6O88545 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cops6O88545 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops6O88545 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops6O88545 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops6O88545 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cops6O88545 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.02■□□□□ -0
Cops6O88545 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cops6O88545 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cops6O88545 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.02■□□□□ -0
Cops6O88545 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cops6O88545 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cops6O88545 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cops6O88545 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cops6O88545 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cops6O88545 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.02■□□□□ -0
Cops6O88545 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cops6O88545 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cops6O88545 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cops6O88545 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.02■□□□□ -0
Cops6O88545 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cops6O88545 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cops6O88545 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cops6O88545 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC15.02■□□□□ -0
Cops6O88545 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC15.02■□□□□ -0
Cops6O88545 Gm10051-201ENSMUST00000145209 414 ntBASIC15.02■□□□□ -0
Cops6O88545 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cops6O88545 Gm3508-201ENSMUST00000186012 792 ntBASIC15.02■□□□□ -0
Cops6O88545 Gm37835-201ENSMUST00000193305 361 ntBASIC15.02■□□□□ -0
Cops6O88545 Gm44711-201ENSMUST00000205414 1264 ntBASIC15.02■□□□□ -0
Cops6O88545 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC15.02■□□□□ -0
Cops6O88545 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cops6O88545 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops6O88545 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops6O88545 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops6O88545 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops6O88545 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops6O88545 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops6O88545 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops6O88545 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cops6O88545 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cops6O88545 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Cops6O88545 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops6O88545 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops6O88545 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cops6O88545 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops6O88545 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cops6O88545 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cops6O88545 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cops6O88545 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops6O88545 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cops6O88545 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops6O88545 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops6O88545 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cops6O88545 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops6O88545 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.01□□□□□ -0.01
Cops6O88545 Gm14247-201ENSMUST00000120950 237 ntBASIC15.01□□□□□ -0.01
Cops6O88545 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops6O88545 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC15.01□□□□□ -0.01
Cops6O88545 Gm23085-201ENSMUST00000157849 293 ntBASIC15.01□□□□□ -0.01
Cops6O88545 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC15.01□□□□□ -0.01
Cops6O88545 Gm8100-201ENSMUST00000182906 988 ntBASIC15.01□□□□□ -0.01
Cops6O88545 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms