Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Gm13996-201ENSMUST00000118456 430 ntBASIC12.31□□□□□ -0.44
Gm3139J3QK78 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.31□□□□□ -0.44
Gm3139J3QK78 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3139J3QK78 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.31□□□□□ -0.44
Gm3139J3QK78 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3139J3QK78 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.31□□□□□ -0.44
Gm3139J3QK78 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.31□□□□□ -0.44
Gm3139J3QK78 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.31□□□□□ -0.44
Gm3139J3QK78 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm3139J3QK78 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3139J3QK78 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.3□□□□□ -0.44
Gm3139J3QK78 Gm11989-201ENSMUST00000117240 672 ntBASIC12.3□□□□□ -0.44
Gm3139J3QK78 Gm11362-201ENSMUST00000118838 850 ntBASIC12.3□□□□□ -0.44
Gm3139J3QK78 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.3□□□□□ -0.44
Gm3139J3QK78 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Gm45186-201ENSMUST00000206874 478 ntBASIC12.3□□□□□ -0.44
Gm3139J3QK78 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3139J3QK78 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.3□□□□□ -0.44
Gm3139J3QK78 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.3□□□□□ -0.44
Gm3139J3QK78 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.3□□□□□ -0.44
Gm3139J3QK78 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.3□□□□□ -0.44
Gm3139J3QK78 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.3□□□□□ -0.44
Gm3139J3QK78 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.29□□□□□ -0.44
Gm3139J3QK78 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.29□□□□□ -0.44
Gm3139J3QK78 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.29□□□□□ -0.44
Gm3139J3QK78 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Gm18711-201ENSMUST00000199341 750 ntBASIC12.29□□□□□ -0.44
Gm3139J3QK78 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm3139J3QK78 Gm44262-201ENSMUST00000204969 372 ntBASIC12.29□□□□□ -0.44
Gm3139J3QK78 Gm45224-201ENSMUST00000208203 414 ntBASIC12.29□□□□□ -0.44
Gm3139J3QK78 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms